diff --git a/utils.R b/utils.R index 38582a3..a5a54cd 100644 --- a/utils.R +++ b/utils.R @@ -81,6 +81,9 @@ sma_load_data <- function(file) { # At this time only solid tumors are important sma <- filter(sma, diagnosis_type == "solid") + # Condense 'Ewing Sarcom' + levels(sma$diagnosis)[match("Ewing sarcoma", levels(sma$diagnosis))] <- "Ewing sarcoma / PNET" + # After filtering unused levels must be cleared from the data sma <- droplevels(sma)