jsauer/secmalasct
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Jens Sauer 792b42373e Merge branch 'data' 
* data:
  Use data from repository
  Add data to repository
2020-11-17 19:50:01 +01:00
data
Add data to repository
2020-11-17 19:49:08 +01:00
.gitignore
Add secondary malignancy plots
2020-11-17 18:21:54 +01:00
plots.R
Rename plot_survival.R
2020-11-17 18:21:54 +01:00
README.md
Rename plot_survival.R
2020-11-17 18:21:54 +01:00
secmal.R
secmal: Fix median survival line warning
2020-11-17 19:45:18 +01:00
survival.R
Introduce initialization function
2020-11-17 18:17:40 +01:00
utils.R
Use data from repository
2020-11-17 19:49:22 +01:00

README.md

secMalASCT statistical analysis

How to run

  1. Clone the repository
  2. Open R and source one of the R files

survival.R

Source this file and call one of the plot functions to show plot in R. sma_plot_file_surv() will save all plots to files.

secmal.R

This file contains the secondary malignancy plots. You can call the functions in R or sma_plot_file_secmal() to save them to files.

plots.R

Special script to generate all plots and save them in files. Run with Rscript plots.R

Dependencies

  • git
  • R

R packages used

  • tidyverse
  • survival
  • survminer
Description
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Readme 184 KiB